STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpBFAD dependent oxidoreductase. (541 aa)    
Predicted Functional Partners:
Lstg_1863
acyl-CoA synthetase.
  
 0.862
hmp
Oxidoreductase, FAD-binding protein.
     
 0.788
Lstg_2850
Polyketide synthase.
  
 0.743
lgrB
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.738
Lstg_1386
acyl-CoA synthetase.
   
 0.680
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
    
  0.624
Lstg_2389
Hypothetical protein.
  
   
 0.621
Lstg_0996
(2-pyrone-4,6-)dicarboxylic acid hydrolase.
  
  
  0.615
Lstg_2379
Cytochrome P450.
  
 0.583
Lstg_1571
Taurine catabolism dioxygenase TauD, TfdA family.
  
  
  0.568
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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