Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Mnod_0009PFAM: BolA family protein; KEGG: met:M446_0006 BolA family protein; Belongs to the BolA/IbaG family. (78 aa)    
Predicted Functional Partners:
Mnod_0011
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: met:M446_0007 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.991
Mnod_0010
PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_1125 hypothetical protein.
 
    0.853
purL
Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist [...]
       0.808
Mnod_4674
PFAM: Ferritin Dps family protein; KEGG: met:M446_4661 ferritin Dps family protein; Belongs to the Dps family.
   
  
 0.580
Mnod_5953
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.580
Mnod_5922
PFAM: 3'-5' exonuclease; KEGG: met:M446_5275 3'-5' exonuclease.
  
     0.552
Mnod_4668
KEGG: met:M446_4778 hypothetical protein.
  
    0.538
Mnod_0006
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spe:Spro_1016 TonB-dependent siderophore receptor.
       0.494
Mnod_0007
PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_4238 PepSY-associated TM helix.
       0.494
Mnod_0012
PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: met:M446_0008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.494
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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