Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Mnod_0012PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: met:M446_0008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (299 aa)    
Predicted Functional Partners:
Mnod_4002
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: met:M446_3531 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.813
Mnod_2758
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bja:blr5308 anti-oxidant protein.
  
 
 0.803
Mnod_5188
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: met:M446_4464 thioredoxin.
  
 
 0.784
Mnod_1625
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: met:M446_0473 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.783
Mnod_3933
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: met:M446_4174 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.783
Mnod_5011
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: met:M446_4174 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.783
Mnod_0814
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: sme:SMb20213 hypothetical protein.
  
 
 0.743
Mnod_4744
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: met:M446_4234 UBA/ThiF-type NAD/FAD binding protein.
  
    0.641
Mnod_0011
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: met:M446_0007 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.606
Mnod_7297
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: met:M446_5989 redoxin domain-containing protein.
  
 
 0.556
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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