Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0063PFAM: iron-containing alcohol dehydrogenase; KEGG: met:M446_3465 iron-containing alcohol dehydrogenase. (379 aa)    
Predicted Functional Partners:
Mnod_0746
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_1176 aldehyde dehydrogenase.
  
 0.926
Mnod_3732
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pst:PSPTO_0257 succinate-semialdehyde dehydrogenase.
 
 0.926
Mnod_3956
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_3846 aldehyde dehydrogenase.
  
 0.926
Mnod_3971
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_3846 aldehyde dehydrogenase.
  
 0.926
Mnod_4681
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_0786 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.926
Mnod_5513
PFAM: aminotransferase class-III; KEGG: met:M446_3814 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.903
Mnod_5387
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: met:M446_6106 zinc-binding alcohol dehydrogenase family protein.
  
 
 0.627
Mnod_6150
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: har:HEAR1610 putative alcohol dehydrogenase with NAD(P)-binding.
  
 
 0.627
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.623
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
  
 0.544
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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