Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0121PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_4754 major facilitator transporter. (468 aa)    
Predicted Functional Partners:
Mnod_2777
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_5703 major facilitator transporter.
 
     0.706
Mnod_3237
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_6871 major facilitator transporter.
  
   
 0.581
Mnod_0122
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: met:M446_4755 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.537
Mnod_7103
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: dac:Daci_3815 major facilitator transporter.
 
     0.530
aroE-2
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.517
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.483
Mnod_3364
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bph:Bphy_6160 major facilitator superfamily MFS_1.
 
     0.475
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.