Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0142TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: met:M446_2680 asparagine synthase amidotransferase. (590 aa)    
Predicted Functional Partners:
Mnod_0141
TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: phosphoribosylglycinamide synthetase; GCN5-related N-acetyltransferase; RimK domain protein ATP-grasp; KEGG: met:M446_2679 GNAT family acetyltransferase.
 
 
 0.982
Mnod_0140
TIGRFAM: hydrolase, peptidase M42 family; PFAM: peptidase M20; peptidase M42 family protein; KEGG: met:M446_2678 peptidase M42 family hydrolase.
 
  
 0.957
Mnod_6993
Asparagine synthase; PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: rca:Rcas_2336 asparagine synthetase B.
  
  
 
0.926
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: met:M446_4349 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.922
argG
PFAM: argininosuccinate synthase; KEGG: met:M446_6641 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.920
Mnod_2741
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: mrd:Mrad2831_4295 aspartate racemase.
    
 0.919
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.917
Mnod_0303
PFAM: Asparaginase/glutaminase; KEGG: met:M446_2302 asparaginase.
     
 0.913
Mnod_5349
TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: met:M446_5042 L-asparaginase, type II; Belongs to the asparaginase 1 family.
     
 0.913
Mnod_0169
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: met:M446_4590 L-aspartate oxidase.
     
 0.911
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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