STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0150PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: met:M446_4609 peptidase S1 and S6 chymotrypsin/Hap. (268 aa)    
Predicted Functional Partners:
Mnod_1736
PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: met:M446_0402 alpha-2-macroglobulin domain-containing protein.
  
 
 0.909
Mnod_0636
KEGG: cyt:cce_5237 hypothetical protein.
    
 0.872
Mnod_4174
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: met:M446_4439 peptidase S1 and S6 chymotrypsin/Hap.
 
   
 0.742
Mnod_6120
Protease; KEGG: cyt:cce_0593 protease.
 
 0.667
Mnod_7403
PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: met:M446_6581 multicopper oxidase type 3.
    
 0.666
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 
 0.652
Mnod_2090
PFAM: Ankyrin; KEGG: met:M446_4648 ankyrin.
    
 0.638
Mnod_2960
Hypothetical protein.
    
 0.638
Mnod_2971
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: dge:Dgeo_2081 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
 0.622
Mnod_2958
PFAM: Heat shock protein 70; KEGG: rso:RSp0521 chaperone transmembrane protein.
   
 
 0.597
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.