STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0200PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rle:pRL120704 putative hydratase/decarboxylase. (260 aa)    
Predicted Functional Partners:
Mnod_0105
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbt:BBta_0175 putative hydratase/decarboxylase.
  
  
 
0.927
Mnod_7095
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_6205 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.710
Mnod_1844
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_4880 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.709
Mnod_6953
PFAM: HpcH/HpaI aldolase; KEGG: rso:RS00880 aldolase protein; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.701
Mnod_1191
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mpo:Mpop_1046 maleylacetoacetate isomerase.
     
  0.500
Mnod_1454
PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4031 alpha/beta hydrolase.
 
  
 0.457
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
  
 0.435
Mnod_7105
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:blr2390 vanillate O-demethylase oxygenase subunit.
 
   
 0.408
Mnod_2894
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: met:M446_4912 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
  
  
 0.407
Mnod_6025
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: met:M446_5802 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  
 0.407
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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