STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0205KEGG: met:M446_3789 hypothetical protein. (422 aa)    
Predicted Functional Partners:
Mnod_0204
KEGG: mrd:Mrad2831_1408 hypothetical protein.
       0.686
Mnod_1723
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: met:M446_0415 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
 
     0.584
Mnod_0074
KEGG: met:M446_6153 hypothetical protein.
    
   0.565
Mnod_1951
PFAM: dienelactone hydrolase; KEGG: mpo:Mpop_1756 carboxymethylenebutenolidase.
    
   0.565
Mnod_2323
PFAM: dienelactone hydrolase; KEGG: scl:sce9042 hypothetical protein.
    
   0.565
Mnod_7614
KEGG: met:M446_2534 hypothetical protein.
  
     0.528
Mnod_2719
KEGG: met:M446_2534 hypothetical protein.
  
     0.477
Mnod_0367
KEGG: met:M446_2242 hypothetical protein.
       0.470
Mnod_3824
PFAM: ERF family protein; KEGG: xau:Xaut_3683 ERF family protein.
  
     0.469
Mnod_1671
PFAM: protein of unknown function DUF1206; KEGG: met:M446_0424 hypothetical protein.
  
     0.425
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.