STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0224PFAM: inner-membrane translocator; KEGG: met:M446_3167 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (441 aa)    
Predicted Functional Partners:
Mnod_0225
PFAM: inner-membrane translocator; KEGG: met:M446_3168 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
Mnod_0226
KEGG: met:M446_3169 ABC transporter, periplasmic branched chain amino acid binding protein.
 
 
  0.993
Mnod_0223
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3166 ABC transporter related.
  
 0.975
Mnod_0222
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3165 ABC transporter related.
 
  
 0.974
Mnod_3426
PFAM: inner-membrane translocator; KEGG: bja:blr3184 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.849
Mnod_0065
PFAM: inner-membrane translocator; KEGG: met:M446_4763 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.824
Mnod_1099
PFAM: inner-membrane translocator; KEGG: met:M446_2127 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.803
Mnod_6586
PFAM: inner-membrane translocator; KEGG: met:M446_6490 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.796
Mnod_1211
PFAM: inner-membrane translocator; KEGG: met:M446_3642 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.792
Mnod_3749
PFAM: inner-membrane translocator; KEGG: bcs:BCAN_B0396 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.791
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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