Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0277PFAM: high-affinity nickel-transporter; KEGG: met:M446_2333 high-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family. (337 aa)    
Predicted Functional Partners:
Mnod_0278
PFAM: protein of unknown function DUF1007; KEGG: met:M446_2332 hypothetical protein.
   
 0.987
Mnod_5736
PFAM: protein of unknown function DUF1007; KEGG: met:M446_1660 hypothetical protein.
   
 0.889
Mnod_1043
PFAM: protein of unknown function DUF1007; KEGG: met:M446_1660 hypothetical protein.
 
   
 0.800
Mnod_0279
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2331 LysR family transcriptional regulator.
       0.617
Mnod_0718
KEGG: met:M446_1117 hypothetical protein.
  
     0.593
Mnod_7575
PFAM: RDD domain containing protein; KEGG: met:M446_6837 RDD domain-containing protein.
  
     0.578
Mnod_7582
KEGG: met:M446_6846 hypothetical protein.
  
     0.557
Mnod_6604
KEGG: met:M446_6067 hypothetical protein.
  
     0.538
Mnod_7180
PFAM: Invasion associated locus B family protein; KEGG: met:M446_6313 invasion associated locus B family protein.
  
     0.532
Mnod_1064
PFAM: conserved hypothetical protein; KEGG: met:M446_2096 hypothetical protein.
  
     0.521
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.