Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0292PFAM: MaoC domain protein dehydratase; KEGG: met:M446_2315 dehydratase. (166 aa)    
Predicted Functional Partners:
Mnod_0293
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_2314 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.962
Mnod_0291
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: met:M446_2316 carbamoyl-phosphate synthase L chain ATP-binding.
  
  
 0.849
Mnod_0289
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_2318 acyl-CoA dehydrogenase domain-containing protein.
  
 0.738
Mnod_0290
PFAM: carboxyl transferase; KEGG: met:M446_2317 propionyl-CoA carboxylase.
 
  
 0.727
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 0.651
Mnod_2815
PFAM: MaoC domain protein dehydratase; KEGG: met:M446_2396 dehydratase.
  
     0.634
Mnod_0294
KEGG: met:M446_2311 putative phenylacetate-CoA ligase.
     
 0.608
Mnod_5949
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_5220 citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.602
Mnod_5249
PFAM: Catalase domain protein; KEGG: met:M446_3285 catalase.
   
 0.601
Mnod_6547
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.601
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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