Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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[Homology]
Score
Mnod_0323TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_2280 HAD family hydrolase. (258 aa)    
Predicted Functional Partners:
Mnod_0320
PFAM: phosphoribulokinase/uridine kinase; KEGG: met:M446_2281 phosphoribulokinase.
 
     0.878
Mnod_6171
PFAM: aminoglycoside phosphotransferase; KEGG: met:M446_6097 hypothetical protein.
  
    0.751
fbp
PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: met:M446_2282 inositol phosphatase/fructose-16-bisphosphatase; Belongs to the FBPase class 1 family.
 
     0.721
Mnod_0318
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2283 LysR family transcriptional regulator.
 
     0.711
Mnod_0324
Signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: met:M446_2279 signal transduction histidine kinase.
  
    0.657
tadA
CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.649
Mnod_7283
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
 
 0.644
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
 
 
 0.613
Mnod_0322
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_0628 methyltransferase type 11.
  
    0.545
Mnod_1739
PFAM: ribulose-phosphate 3-epimerase; KEGG: met:M446_5429 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.498
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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