Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0355TIGRFAM: methyltransferase; KEGG: met:M446_2254 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Mnod_0356
PFAM: protein of unknown function DUF323; KEGG: met:M446_2253 hypothetical protein.
  
 0.989
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: met:M446_1653 histidine ammonia-lyase; Belongs to the PAL/histidase family.
     
  0.900
hisD-2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.900
Mnod_0354
KEGG: met:M446_2255 hypothetical protein.
       0.789
Mnod_1502
PFAM: glutamine amidotransferase class-II; KEGG: met:M446_0676 glutamine amidotransferase class-II.
  
  
 0.680
Mnod_5929
PFAM: glutamine amidotransferase class-II; KEGG: met:M446_5266 glutamine amidotransferase class-II.
  
  
 0.680
Mnod_3053
Serine/threonine protein kinase; PFAM: protein of unknown function RIO1; tyrosine protein kinase; protein of unknown function DUF323; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: met:M446_0913 serine/threonine protein kinase.
  
  
 0.649
Mnod_4946
PFAM: Transglycosylase-associated protein; KEGG: met:M446_4920 transglycosylase-associated protein.
   
    0.622
Mnod_6532
PFAM: Transglycosylase-associated protein; KEGG: met:M446_5923 transglycosylase-associated protein.
   
    0.622
Mnod_7293
Glutamate/cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
  
 0.622
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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