STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0443PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpo:Mpop_2285 glyoxalase/bleomycin resistance protein/dioxygenase. (319 aa)    
Predicted Functional Partners:
Mnod_5284
PFAM: phospholipase/Carboxylesterase; KEGG: met:M446_3092 phospholipase/carboxylesterase.
  
 0.962
Mnod_0441
PFAM: LmbE family protein; KEGG: met:M446_2069 LmbE family protein.
  
  
 0.661
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.657
Mnod_5141
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_4513 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.628
Mnod_2083
TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: met:M446_4655 3-oxoadipate enol-lactonase.
  
  
 0.534
Mnod_0442
KEGG: met:M446_2068 hypothetical protein.
       0.515
Mnod_0038
TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: met:M446_0036 methylmalonyl-CoA mutase, large subunit.
     
 0.504
Mnod_4573
TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: met:M446_3042 methylmalonyl-CoA mutase, large subunit.
     
 0.504
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.471
Mnod_4006
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_3601 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
    0.468
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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