Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0471PFAM: glycosyl transferase group 1; KEGG: met:M446_1719 glycosyl transferase group 1. (422 aa)    
Predicted Functional Partners:
Mnod_0472
PFAM: glycosyl transferase group 1; KEGG: met:M446_1720 glycosyl transferase group 1.
 
    
0.744
Mnod_0470
TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: met:M446_1718 protease Do; Belongs to the peptidase S1C family.
  
    0.663
Mnod_0676
KEGG: met:M446_1766 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
 
  
 0.661
Mnod_4360
KEGG: mex:Mext_4583 polysaccharide biosynthesis protein.
 
    0.525
Mnod_5486
PFAM: GSCFA domain protein; KEGG: mrd:Mrad2831_4329 GSCFA domain-containing protein.
  
     0.517
Mnod_4355
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4589 lipopolysaccharide biosynthesis protein.
 
  
 0.505
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.504
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.491
Mnod_7549
KEGG: met:M446_6810 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
 0.491
Mnod_1108
KEGG: met:M446_2137 hypothetical protein.
  
 
   0.486
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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