Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_0478PFAM: ABC-2 type transporter; KEGG: met:M446_1714 ABC-2 type transporter. (253 aa)    
Predicted Functional Partners:
Mnod_0477
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1715 ABC transporter related.
  
 0.984
Mnod_4676
PFAM: protein of unknown function DUF181; KEGG: met:M446_3967 hypothetical protein.
  
  
 0.672
nodI
Nodulation ABC transporter NodI; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
  
 0.656
Mnod_0698
PFAM: Abortive infection protein; KEGG: met:M446_1092 abortive infection protein.
  
  
 0.628
Mnod_0476
PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bra:BRADO2400 serine protease DO-like precursor.
       0.580
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
  
 0.550
Mnod_7206
PFAM: nitroreductase; KEGG: met:M446_6294 nitroreductase.
  
  
 0.545
Mnod_5313
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_5009 ABC transporter related.
  
  
 0.531
Mnod_0345
PFAM: nitroreductase; KEGG: met:M446_2263 nitroreductase.
  
  
 0.528
Mnod_1159
PFAM: nitroreductase; KEGG: met:M446_2200 nitroreductase.
  
  
 0.528
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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