Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Mnod_0514PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_1616 extracellular solute-binding protein. (617 aa)    
Predicted Functional Partners:
Mnod_0515
PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_1615 extracellular solute-binding protein.
 
  
 
0.986
Mnod_0516
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1614 binding-protein-dependent transport systems inner membrane component.
 
  
 0.971
Mnod_4147
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4411 binding-protein-dependent transport systems inner membrane component.
 
  
 0.837
Mnod_5135
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_4520 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.715
Mnod_6090
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_5346 ABC transporter related.
 
  
 0.698
Mnod_0403
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_2207 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.571
Mnod_0401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2209 binding-protein-dependent transport systems inner membrane component.
  
 
 0.568
Mnod_0489
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1691 alkaline phosphatase.
  
 
 0.568
Mnod_1355
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0891 binding-protein-dependent transport systems inner membrane component.
  
 
 0.568
Mnod_1508
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0670 binding-protein-dependent transport systems inner membrane component.
  
 
 0.568
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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