STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0519KEGG: met:M446_2036 TRAP-type uncharacterized transport system periplasmic component-like protein. (463 aa)    
Predicted Functional Partners:
Mnod_5195
KEGG: met:M446_4457 hypothetical protein.
  
     0.749
Mnod_0520
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.746
Mnod_0676
KEGG: met:M446_1766 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
  
     0.742
Mnod_4360
KEGG: mex:Mext_4583 polysaccharide biosynthesis protein.
  
     0.738
Mnod_1108
KEGG: met:M446_2137 hypothetical protein.
  
     0.710
Mnod_3737
KEGG: mpo:Mpop_1316 hypothetical protein.
  
     0.701
Mnod_1049
PFAM: cyclic nucleotide-binding; KEGG: met:M446_1668 cyclic nucleotide-binding protein.
  
     0.695
Mnod_5605
SMART: Parallel beta-helix repeat; KEGG: mpo:Mpop_4608 hemolysin-type calcium-binding region.
  
     0.694
Mnod_1480
PFAM: OmpA/MotB domain protein; KEGG: met:M446_0701 hypothetical protein.
  
    0.692
Mnod_0156
KEGG: met:M446_4603 hypothetical protein.
  
     0.691
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.