STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0670PFAM: Cobyrinic acid ac-diamide synthase; KEGG: met:M446_1849 cobyrinic acid ac-diamide synthase. (300 aa)    
Predicted Functional Partners:
Mnod_1025
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: met:M446_1407 ParB-like partition protein; Belongs to the ParB family.
 
 
 0.880
Mnod_0671
KEGG: met:M446_1848 hypothetical protein.
       0.853
Mnod_0878
PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: mex:Mext_0806 DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.574
Mnod_3735
TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rle:pRL100002 putative RepB replication protein; Belongs to the ParB family.
  
 
 0.548
Mnod_5872
TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: met:M446_5376 plasmid partitioning protein RepB; Belongs to the ParB family.
  
 
 0.548
Mnod_6266
PFAM: ParB domain protein nuclease; KEGG: sml:Smlt1882 putative DNA methylase.
  
 
 0.520
Mnod_6955
PFAM: ParB domain protein nuclease; KEGG: sdn:Sden_0583 ParB-like nuclease.
  
 
 0.520
Mnod_6991
PFAM: ParB domain protein nuclease; KEGG: oan:Oant_1511 ParB domain protein nuclease.
  
 
 0.520
Mnod_0669
KEGG: met:M446_1850 hypothetical protein.
       0.478
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.464
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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