Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0676KEGG: met:M446_1766 membrane protein involved in the export of O-antigen and teichoic acid-like protein. (479 aa)    
Predicted Functional Partners:
Mnod_0156
KEGG: met:M446_4603 hypothetical protein.
 
     0.760
Mnod_1108
KEGG: met:M446_2137 hypothetical protein.
 
     0.759
Mnod_0107
KEGG: met:M446_4743 TRAP-type uncharacterized transport system periplasmic component-like protein.
  
     0.749
Mnod_0519
KEGG: met:M446_2036 TRAP-type uncharacterized transport system periplasmic component-like protein.
  
     0.742
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.741
Mnod_1641
KEGG: met:M446_0456 hypothetical protein.
  
     0.731
Mnod_2172
KEGG: met:M446_2469 hypothetical protein.
  
     0.711
Mnod_0472
PFAM: glycosyl transferase group 1; KEGG: met:M446_1720 glycosyl transferase group 1.
 
  
 0.703
Mnod_6053
KEGG: met:M446_5848 hypothetical protein.
  
   
 0.701
Mnod_0182
PFAM: transcription activator effector binding; KEGG: met:M446_3657 transcription activator effector binding.
  
     0.696
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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