STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0693KEGG: met:M446_1097 hypothetical protein. (88 aa)    
Predicted Functional Partners:
Mnod_0694
KEGG: met:M446_1096 hypothetical protein.
       0.853
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.853
Mnod_7077
PFAM: protein of unknown function DUF177; KEGG: met:M446_6228 hypothetical protein.
  
     0.729
Mnod_6738
KEGG: met:M446_6497 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A.
 
     0.670
Mnod_7066
PFAM: protein of unknown function DUF1476; KEGG: met:M446_6239 hypothetical protein.
  
     0.629
Mnod_4624
KEGG: met:M446_2605 hypothetical protein.
  
     0.613
Mnod_5950
PFAM: N-formylglutamate amidohydrolase; KEGG: met:M446_5219 N-formylglutamate amidohydrolase.
  
     0.610
Mnod_5968
KEGG: met:M446_5200 hypothetical protein; Belongs to the UPF0335 family.
  
     0.592
Mnod_0697
PFAM: protein of unknown function DUF1321; KEGG: met:M446_1093 hypothetical protein.
 
    0.587
Mnod_0696
PFAM: cytochrome P450; KEGG: met:M446_1094 cytochrome P450.
       0.579
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.