STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0715KEGG: met:M446_1120 hypothetical protein. (369 aa)    
Predicted Functional Partners:
Mnod_7181
KEGG: met:M446_6312 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein.
  
     0.769
Mnod_0717
KEGG: met:M446_1118 hypothetical protein.
 
     0.754
Mnod_5867
KEGG: met:M446_5371 putative acyl-CoA N-acyltransferase related protein.
  
     0.753
Mnod_4552
Porin; KEGG: met:M446_3063 porin.
  
     0.750
Mnod_1641
KEGG: met:M446_0456 hypothetical protein.
  
     0.747
Mnod_2828
TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD family protein; KEGG: met:M446_2383 pilus biogenesis lipoprotein CpaD.
  
     0.745
Mnod_6363
PFAM: AsmA family protein; KEGG: met:M446_5855 AsmA family protein.
  
     0.730
Mnod_7239
KEGG: met:M446_6052 hypothetical protein.
  
     0.727
Mnod_2172
KEGG: met:M446_2469 hypothetical protein.
  
     0.726
Mnod_7568
KEGG: met:M446_6832 hypothetical protein.
  
     0.722
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.