STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0765PFAM: response regulator receiver; KEGG: met:M446_2050 response regulator receiver protein. (130 aa)    
Predicted Functional Partners:
Mnod_0766
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: met:M446_2049 CheA signal transduction histidine kinase.
 
 0.989
Mnod_1691
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: met:M446_4838 CheA signal transduction histidine kinase.
 
 0.977
Mnod_5453
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: met:M446_0244 CheA signal transduction histidine kinase.
 
0.976
Mnod_0760
PFAM: chemotaxis sensory transducer; KEGG: met:M446_2055 methyl-accepting chemotaxis sensory transducer.
 
 0.973
Mnod_0761
PFAM: CheW domain protein; KEGG: met:M446_2054 CheW protein.
 
 
 0.964
Mnod_0769
PFAM: CheC domain protein; KEGG: met:M446_2046 CheC, inhibitor of MCP methylation.
 
  
 0.964
Mnod_6060
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 0.912
Mnod_6294
PFAM: surface presentation of antigens (SPOA) protein; KEGG: met:M446_5312 surface presentation of antigens (SpoA) protein.
   
 0.912
Mnod_0191
Putative chemotaxis phosphatase, CheZ; KEGG: met:M446_3649 hypothetical protein.
  
 
 0.909
Mnod_0387
KEGG: met:M446_2224 putative chemotaxis phosphatase, CheZ.
  
 
 0.909
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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