Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0774PFAM: acyltransferase 3; KEGG: rle:RL3831 putative O-acetyl transferase. (367 aa)    
Predicted Functional Partners:
Mnod_3152
TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: met:M446_6856 malonate decarboxylase acyl carrier protein.
  
     0.514
Mnod_0626
KEGG: met:M446_0803 hypothetical protein.
  
     0.484
Mnod_3154
TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: met:M446_6854 malonate decarboxylase, gamma subunit.
  
     0.478
Mnod_3155
TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: met:M446_6853 hypothetical protein.
  
     0.471
Mnod_5911
KEGG: met:M446_5286 hypothetical protein.
  
  
 0.441
Mnod_3151
TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: met:M446_6857 malonate decarboxylase, alpha subunit.
 
     0.432
Mnod_2578
KEGG: rpb:RPB_1959 hypothetical protein.
  
     0.422
Mnod_3153
TIGRFAM: malonate decarboxylase, beta subunit; KEGG: mex:Mext_0026 malonate decarboxylase subunit beta.
 
     0.420
Mnod_0067
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4765 ABC transporter related.
  
     0.402
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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