Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_0813PFAM: alpha/beta hydrolase fold; KEGG: smd:Smed_3910 alpha/beta hydrolase fold. (350 aa)    
Predicted Functional Partners:
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 0.825
Mnod_0814
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: sme:SMb20213 hypothetical protein.
 
 
 
 0.764
Mnod_2288
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: acr:Acry_1146 metal-dependent phosphohydrolase.
  
     0.659
Mnod_7641
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: reh:H16_B1406 predicted nucleoside-diphosphate-sugar epimerase.
 
  
 0.625
Mnod_0010
PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_1125 hypothetical protein.
  
 
  0.538
Mnod_7642
PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpt:Bpet3859 Nectarin 1 precursor.
  
    0.535
Mnod_6437
KEGG: mlo:mll4584 hypothetical protein.
 
   
 0.469
Mnod_0819
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_2090 short-chain dehydrogenase/reductase SDR.
  
  0.425
Mnod_0787
KEGG: met:M446_4787 putative transmembrane anti-sigma factor.
  
    0.406
Mnod_0812
KEGG: met:M446_3613 putative adenylate/guanylate cyclase.
       0.401
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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