Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_0827PFAM: protein of unknown function DUF1428; KEGG: reh:H16_A2720 hypothetical protein. (116 aa)    
Predicted Functional Partners:
Mnod_0829
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: oan:Oant_2550 activator of HSP90 ATPase 1 family protein.
 
     0.781
Mnod_0828
PFAM: regulatory protein ArsR; KEGG: cak:Caul_1116 ArsR family transcriptional regulator.
       0.732
Mnod_0826
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: cak:Caul_2584 3-demethylubiquinone-9 3-methyltransferase.
 
     0.730
Mnod_0830
PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_C_4057 hypothetical protein.
       0.478
Mnod_0705
KEGG: met:M446_2059 hypothetical protein.
   
    0.422
Mnod_1327
KEGG: met:M446_0919 hypothetical protein.
   
    0.422
Mnod_6363
PFAM: AsmA family protein; KEGG: met:M446_5855 AsmA family protein.
   
    0.422
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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