Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Mnod_0868PFAM: glycosyl transferase family 2; KEGG: azo:azo3259 glycosyltransferase. (331 aa)    
Predicted Functional Partners:
Mnod_5890
PFAM: glycosyl transferase family 2; KEGG: dsh:Dshi_4143 glycosyl transferase family protein.
 
 
 0.640
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.565
Mnod_6856
PFAM: glycosyl transferase family 2; KEGG: rle:pRL110395 putative succinoglycan biosynthesis protein.
 
    0.525
Mnod_0871
PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_4553 glycosyl transferase group 1.
 
    0.512
Mnod_0869
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: met:M446_1078 polysaccharide biosynthesis protein.
  
  
 0.506
Mnod_0866
KEGG: mpo:Mpop_3545 hypothetical protein.
 
  
 0.496
Mnod_4364
PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4622 glycosyl transferase group 1.
  
    0.452
Mnod_4345
PFAM: glycosyl transferase family 2; KEGG: rrj:RrIowa_0552 glycosyltransferase.
  
     0.423
Mnod_6182
PFAM: TPR repeat-containing protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0540 peptidase C14 caspase catalytic subunit P20.
 
 
 
 0.415
Mnod_2480
PFAM: TPR repeat-containing protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0540 peptidase C14 caspase catalytic subunit P20.
 
 
 
 0.412
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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