Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0871PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_4553 glycosyl transferase group 1. (383 aa)    
Predicted Functional Partners:
Mnod_0869
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: met:M446_1078 polysaccharide biosynthesis protein.
  
  
 0.526
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.519
Mnod_0868
PFAM: glycosyl transferase family 2; KEGG: azo:azo3259 glycosyltransferase.
 
    0.512
Mnod_3184
PFAM: glycosyl transferase group 1; KEGG: met:M446_4022 glycosyl transferase group 1.
  
     0.506
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.491
Mnod_7549
KEGG: met:M446_6810 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
 0.491
Mnod_0870
PFAM: acyltransferase 3; KEGG: swi:Swit_4615 acyltransferase 3.
  
    0.466
Mnod_5556
PFAM: Amylo-alpha-16-glucosidase; KEGG: met:M446_5323 amylo-alpha-16-glucosidase.
 
 
 0.417
Mnod_5889
PFAM: polysaccharide biosynthesis protein; KEGG: dsh:Dshi_4129 polysaccharide biosynthesis protein.
 
  
 0.414
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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