Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0889PFAM: Dimethylmenaquinone methyltransferase; KEGG: bpt:Bpet4448 putative dimethylmenaquinone methyltransferase family protein. (223 aa)    
Predicted Functional Partners:
Mnod_0890
PFAM: aminotransferase class I and II; KEGG: bpt:Bpet4447 aspartate aminotransferase.
       0.723
Mnod_0891
PFAM: extracellular solute-binding protein family 3; KEGG: bpt:Bpet4446 solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
    0.644
Mnod_0888
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_3079 transcriptional regulator, LysR family.
 
     0.609
Mnod_1280
PFAM: amidohydrolase 2; KEGG: met:M446_1031 amidohydrolase 2.
 
   
 0.414
Mnod_0892
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet4445 amino acids ABC transporter, permease protein.
  
    0.407
Mnod_0893
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet4444 amino acids ABC transporter, permease protein.
  
    0.405
Mnod_0894
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4478 amino acid ABC transporter, ATP-binding protein.
       0.404
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.