STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_0896PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5167 major facilitator superfamily MFS_1. (462 aa)    
Predicted Functional Partners:
Mnod_0897
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.634
Mnod_0899
PFAM: Allophanate hydrolase subunit 1; KEGG: bcm:Bcenmc03_3056 allophanate hydrolase subunit 1.
       0.556
Mnod_0900
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rso:RS05395 hypothetical protein.
       0.555
Mnod_0898
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.548
Mnod_6582
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_6600 major facilitator transporter.
  
    0.531
Mnod_1467
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_3060 major facilitator transporter.
  
     0.519
Mnod_2761
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_6136 general substrate transporter.
  
    0.482
Mnod_0901
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bll3635 hypothetical protein.
       0.460
Mnod_5206
TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_2950 major facilitator superfamily metabolite/H(+) symporter.
  
    0.450
Mnod_6792
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psb:Psyr_2179 major facilitator transporter.
  
    0.441
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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