Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0961KEGG: met:M446_1673 glycosyl transferase, group 1. (358 aa)    
Predicted Functional Partners:
Mnod_0960
PFAM: glycosyl transferase group 1; KEGG: met:M446_1672 glycosyl transferase group 1.
     0.860
Mnod_0962
Methyltransferase type 11; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: met:M446_1674 methyltransferase type 11.
 
     0.851
Mnod_0959
KEGG: met:M446_1671 nucleotidyl transferase.
 
     0.792
Mnod_0441
PFAM: LmbE family protein; KEGG: met:M446_2069 LmbE family protein.
 
  
 0.692
Mnod_0958
KEGG: met:M446_1670 hypothetical protein.
 
     0.677
Mnod_2693
Hypothetical protein; KEGG: afw:Anae109_2612 cellulose biosynthesis (CelD)-like protein.
  
     0.562
Mnod_0134
KEGG: met:M446_2673 hypothetical protein.
  
     0.535
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.499
Mnod_1597
KEGG: mes:Meso_2483 putative Sir2-like transcriptional silencer protein.
  
     0.490
Mnod_0434
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: met:M446_2076 radical SAM domain-containing protein.
  
     0.467
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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