Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_0982Hypothetical protein; KEGG: mxa:MXAN_6252 glyoxalase family protein. (132 aa)    
Predicted Functional Partners:
Mnod_4966
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:gll0132 hypothetical protein.
 
  
 0.616
Mnod_0981
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_A1934 threonine dehydrogenase (Zn dependent).
       0.547
Mnod_6358
PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: met:M446_5167 MarR family transcriptional regulator.
 
  
 0.529
Mnod_1369
Microcystin LR degradation protein MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.513
cobB-2
PFAM: Silent information regulator protein Sir2; KEGG: met:M446_5854 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
  
    0.483
Mnod_4191
PFAM: carbon starvation protein CstA; KEGG: met:M446_2942 carbon starvation protein CstA.
  
    0.452
Mnod_1364
PFAM: YCII-related; KEGG: bra:BRADO1155 hypothetical protein.
 
    0.450
Mnod_6736
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; KEGG: nwi:Nwi_2138 RNA polymerase sigma factor SigJ.
  
    0.443
Mnod_4259
Microcystin LR degradation protein MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.439
Mnod_4680
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_3965 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.422
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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