Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1026PFAM: Cobyrinic acid ac-diamide synthase; KEGG: met:M446_1408 cobyrinic acid ac-diamide synthase. (282 aa)    
Predicted Functional Partners:
Mnod_1025
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: met:M446_1407 ParB-like partition protein; Belongs to the ParB family.
 
 
 0.977
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
 
  
 0.915
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
    0.855
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.676
Mnod_2891
PFAM: cell divisionFtsK/SpoIIIE; KEGG: met:M446_4908 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.639
Mnod_1816
PFAM: cell divisionFtsK/SpoIIIE; KEGG: met:M446_5497 cell divisionFtsK/SpoIIIE.
  
  
 0.629
Mnod_3735
TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rle:pRL100002 putative RepB replication protein; Belongs to the ParB family.
  
 
 0.583
Mnod_5872
TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: met:M446_5376 plasmid partitioning protein RepB; Belongs to the ParB family.
  
 
 0.583
Mnod_0878
PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: mex:Mext_0806 DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.574
Mnod_2861
KEGG: met:M446_3769 glycosyl transferase family protein.
  
 
 0.567
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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