Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1043PFAM: protein of unknown function DUF1007; KEGG: met:M446_1660 hypothetical protein. (218 aa)    
Predicted Functional Partners:
Mnod_0277
PFAM: high-affinity nickel-transporter; KEGG: met:M446_2333 high-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
   
 0.800
Mnod_4533
KEGG: met:M446_3260 hypothetical protein.
  
     0.592
Mnod_1064
PFAM: conserved hypothetical protein; KEGG: met:M446_2096 hypothetical protein.
  
     0.589
Mnod_1300
PFAM: Extensin family protein; KEGG: met:M446_0950 extensin family protein.
  
     0.554
Mnod_7208
KEGG: met:M446_6292 hypothetical protein.
  
     0.545
Mnod_7506
KEGG: met:M446_6759 hypothetical protein.
  
     0.542
Mnod_4739
PFAM: protein of unknown function DUF1150; KEGG: met:M446_4229 hypothetical protein.
  
     0.495
Mnod_1839
PFAM: Invasion associated locus B family protein; KEGG: met:M446_4885 invasion associated locus B family protein.
  
     0.488
Mnod_2806
PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: met:M446_2407 transglutaminase family protein cysteine peptidase BTLCP.
  
     0.466
Mnod_5963
PFAM: protein of unknown function DUF1036; KEGG: met:M446_5206 hypothetical protein.
  
     0.462
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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