Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1064PFAM: conserved hypothetical protein; KEGG: met:M446_2096 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Mnod_1065
PFAM: NUDIX hydrolase; KEGG: met:M446_2097 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.853
Mnod_1066
KEGG: met:M446_2098 hypothetical protein.
       0.853
Mnod_1067
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR.
       0.853
Mnod_1173
PFAM: lipolytic protein G-D-S-L family; protein of unknown function DUF459; KEGG: met:M446_1808 hypothetical protein.
  
     0.773
Mnod_0719
PFAM: protein of unknown function DUF1214; KEGG: met:M446_1116 hypothetical protein.
  
     0.772
Mnod_1686
KEGG: met:M446_4844 hypothetical protein.
  
     0.772
Mnod_7208
KEGG: met:M446_6292 hypothetical protein.
  
     0.772
Mnod_7506
KEGG: met:M446_6759 hypothetical protein.
  
     0.772
Mnod_0718
KEGG: met:M446_1117 hypothetical protein.
  
     0.771
Mnod_3620
TIGRFAM: flagellar export protein FliJ; KEGG: met:M446_3948 flagellar export protein FliJ.
  
     0.768
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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