Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Mnod_1096Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2124 LysR family transcriptional regulator. (297 aa)    
Predicted Functional Partners:
Mnod_1097
PFAM: protein of unknown function DUF1445; KEGG: met:M446_2125 hypothetical protein; Belongs to the D-glutamate cyclase family.
 
     0.794
Mnod_2343
PFAM: regulatory protein LysR; KEGG: xop:PXO_04629 transcriptional regulator.
  
     0.760
Mnod_0485
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_1695 LysR family transcriptional regulator.
  
     0.710
Mnod_1715
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_4808 LysR family transcriptional regulator.
  
     0.678
Mnod_5497
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_2906 transcriptional regulator.
  
     0.669
Mnod_6901
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_0562 LysR family transcriptional regulator.
  
     0.661
Mnod_2713
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator.
  
     0.647
Mnod_7619
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator.
  
     0.647
Mnod_7247
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_6037 LysR family transcriptional regulator.
  
     0.624
Mnod_1098
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_2126 extracellular ligand-binding receptor.
 
     0.581
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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