Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1107PFAM: DoxX family protein; KEGG: met:M446_2136 DoxX family protein. (168 aa)    
Predicted Functional Partners:
Mnod_1106
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_2134 Bcr/CflA subfamily drug resistance transporter.
       0.751
Mnod_4176
PFAM: DoxX family protein; KEGG: met:M446_4441 DoxX family protein.
  
     0.635
Mnod_4694
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  0.450
Mnod_5730
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  0.450
Mnod_6168
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mma:MM_1461 cation-transporting ATPase.
   
  0.450
Mnod_5605
SMART: Parallel beta-helix repeat; KEGG: mpo:Mpop_4608 hemolysin-type calcium-binding region.
  
    0.445
Mnod_2070
PFAM: protein of unknown function DUF201; KEGG: mpo:Mpop_0684 protein of unknown function DUF201.
  
     0.419
Mnod_5195
KEGG: met:M446_4457 hypothetical protein.
  
     0.404
Mnod_4444
KEGG: met:M446_3249 hypothetical protein.
  
     0.403
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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