STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1133KEGG: mpo:Mpop_2439 hypothetical protein. (50 aa)    
Predicted Functional Partners:
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.853
Mnod_1135
Hypothetical protein.
       0.773
Mnod_1840
KEGG: met:M446_4884 hypothetical protein.
  
     0.737
Mnod_0718
KEGG: met:M446_1117 hypothetical protein.
  
     0.724
Mnod_1173
PFAM: lipolytic protein G-D-S-L family; protein of unknown function DUF459; KEGG: met:M446_1808 hypothetical protein.
  
     0.698
Mnod_5867
KEGG: met:M446_5371 putative acyl-CoA N-acyltransferase related protein.
  
     0.692
Mnod_1686
KEGG: met:M446_4844 hypothetical protein.
  
     0.690
Mnod_4936
KEGG: met:M446_2648 hypothetical protein.
  
     0.682
Mnod_1064
PFAM: conserved hypothetical protein; KEGG: met:M446_2096 hypothetical protein.
  
     0.667
Mnod_1641
KEGG: met:M446_0456 hypothetical protein.
  
     0.654
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.