Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1161PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1795 ABC transporter related. (240 aa)    
Predicted Functional Partners:
Mnod_1162
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1796 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.968
Mnod_1163
PFAM: inner-membrane translocator; KEGG: met:M446_1797 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.954
Mnod_1164
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_1798 extracellular ligand-binding receptor.
 
  
 0.902
Mnod_0333
PFAM: inner-membrane translocator; KEGG: met:M446_2269 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.869
Mnod_1546
PFAM: inner-membrane translocator; KEGG: azc:AZC_3002 ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.858
Mnod_3962
PFAM: inner-membrane translocator; KEGG: met:M446_3841 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.858
Mnod_1100
PFAM: inner-membrane translocator; KEGG: met:M446_2128 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.845
Mnod_2025
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.830
Mnod_0066
PFAM: inner-membrane translocator; KEGG: met:M446_4764 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.829
Mnod_1746
PFAM: inner-membrane translocator; KEGG: met:M446_5436 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.824
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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