Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1202PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bbt:BBta_2683 NADPH dehydrogenase. (780 aa)    
Predicted Functional Partners:
Mnod_1201
PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_2688 putative acid-thiol ligase.
 
 
 0.987
Mnod_1200
PFAM: Endoribonuclease L-PSP; KEGG: bra:BRADO2328 hypothetical protein.
 
  
 0.859
Mnod_1204
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll6081 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.800
Mnod_1213
PFAM: regulatory protein MarR; KEGG: bja:bll6077 transcriptional regulatory protein.
 
  
 0.797
Mnod_1203
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: jan:Jann_1327 acyl-CoA dehydrogenase-like.
 
 
 0.787
Mnod_1207
PFAM: Cupin domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: met:M446_3638 cupin 2 domain-containing protein.
 
  
 0.656
Mnod_1205
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_2681 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.639
Mnod_1212
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_3643 response regulator receiver protein.
 
    0.629
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.622
Mnod_6462
PFAM: thioesterase superfamily protein; KEGG: gtn:GTNG_1890 4-hydroxybenzoyl-CoA thioesterase.
 
   
 0.597
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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