Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1248KEGG: met:M446_1984 hypothetical protein. (502 aa)    
Predicted Functional Partners:
Mnod_1250
PFAM: ApbE family lipoprotein; KEGG: met:M446_1986 hypothetical protein.
 
     0.959
Mnod_1247
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_1983 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
     0.943
Mnod_1249
PFAM: regulatory protein MarR; KEGG: met:M446_1985 MarR family transcriptional regulator.
 
     0.933
Mnod_1246
Hydantoinase B/oxoprolinase; PFAM: molybdopterin dehydrogenase FAD-binding; Hydantoinase B/oxoprolinase; CO dehydrogenase flavoprotein domain protein; KEGG: met:M446_1981 5-oxoprolinase (ATP-hydrolyzing).
 
     0.850
Mnod_1245
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: met:M446_1980 5-oxoprolinase (ATP-hydrolyzing).
 
     0.809
Mnod_1072
PFAM: protein of unknown function DUF1185; KEGG: met:M446_2104 hypothetical protein.
 
     0.800
Mnod_2527
PFAM: protein of unknown function DUF1185; KEGG: mpt:Mpe_A0369 hypothetical protein.
 
     0.799
Mnod_1242
PFAM: inner-membrane translocator; KEGG: met:M446_1977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.753
Mnod_1241
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_1976 extracellular ligand-binding receptor.
 
     0.638
Mnod_1243
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1978 ABC transporter related.
 
    0.576
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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