Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1256TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; KEGG: met:M446_1634 phospho-2-dehydro-3-deoxyheptonate aldolase. (460 aa)    
Predicted Functional Partners:
Mnod_0728
PFAM: Chorismate mutase; KEGG: met:M446_1107 chorismate mutase.
   
 
 0.868
Mnod_2874
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: met:M446_3738 transketolase; Belongs to the transketolase family.
     
 0.824
Mnod_4387
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: met:M446_2740 transketolase; Belongs to the transketolase family.
     
 0.824
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.822
Mnod_3208
PFAM: fructose-bisphosphate aldolase class-I; KEGG: bpy:Bphyt_2128 fructose-bisphosphate aldolase.
     
  0.800
Mnod_4382
PFAM: Transketolase domain protein; KEGG: met:M446_2745 transketolase domain-containing protein.
     
  0.800
Mnod_4383
PFAM: Transketolase central region; Transketolase domain protein; KEGG: met:M446_2744 transketolase central region.
     
  0.800
Mnod_5659
PFAM: Transketolase central region; Transketolase domain protein; KEGG: xau:Xaut_2041 transketolase central region.
     
  0.800
Mnod_5660
PFAM: Transketolase domain protein; KEGG: xau:Xaut_2042 transketolase domain-containing protein.
     
  0.800
Mnod_7283
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
     
  0.800
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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