Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Mnod_1263PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: met:M446_1642 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (390 aa)    
Predicted Functional Partners:
Mnod_1268
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_1649 acyl-CoA dehydrogenase domain-containing protein.
 
  0.940
Mnod_0746
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_1176 aldehyde dehydrogenase.
    
  0.901
Mnod_3732
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pst:PSPTO_0257 succinate-semialdehyde dehydrogenase.
    
  0.901
Mnod_3956
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_3846 aldehyde dehydrogenase.
    
  0.901
Mnod_3971
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_3846 aldehyde dehydrogenase.
    
  0.901
Mnod_4681
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_0786 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.901
Mnod_1128
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
  0.900
Mnod_1264
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: met:M446_1643 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 
 0.763
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
       0.494
Mnod_2776
PFAM: pyruvate carboxyltransferase; KEGG: met:M446_1922 hydroxymethylglutaryl-CoA lyase.
 
 
  0.473
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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