Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1266PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1647 binding-protein-dependent transport systems inner membrane component. (294 aa)    
Predicted Functional Partners:
Mnod_1265
PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_1646 extracellular solute-binding protein.
 
 0.998
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.996
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.994
Mnod_6752
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6663 binding-protein-dependent transport systems inner membrane component.
 
 0.987
Mnod_6751
PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_6664 extracellular solute-binding protein.
 
 0.986
Mnod_1412
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: met:M446_0823 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.969
Mnod_5670
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3448 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.965
Mnod_5669
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_2592 putative ABC transport system permease protein.
 
 
 0.941
Mnod_1415
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0820 binding-protein-dependent transport systems inner membrane component.
 
 
 0.933
Mnod_6753
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6662 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.916
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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