Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
Mnod_1329KEGG: met:M446_0917 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region. (349 aa)    
Predicted Functional Partners:
Mnod_0270
KEGG: met:M446_2339 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein.
 
 
 0.802
Mnod_0429
KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
  
 0.770
Mnod_3324
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: met:M446_4332 diguanylate cyclase.
 
 
 0.757
Mnod_3498
Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
  
 0.754
Mnod_4164
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: met:M446_4429 diguanylate cyclase.
 
 
 0.746
Mnod_5528
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: met:M446_5143 diguanylate cyclase/phosphodiesterase.
 
  
 0.738
Mnod_6350
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: met:M446_5176 diguanylate cyclase/phosphodiesterase.
 
  
 0.732
Mnod_3642
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: met:M446_0207 diguanylate cyclase/phosphodiesterase.
 
  
 0.722
Mnod_5350
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: met:M446_5043 response regulator receiver modulated diguanylate cyclase.
 
   
 0.706
Mnod_2801
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: reh:H16_B1591 putative GGDEF family protein.
 
 
 0.703
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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