Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_1358PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_0884 major facilitator transporter. (489 aa)    
Predicted Functional Partners:
Mnod_6435
PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1614 putative transporter protein.
  
   
 0.636
Mnod_1359
KEGG: bja:bll1287 hypothetical protein.
       0.497
Mnod_4183
KEGG: rec:RHECIAT_PC0000307 putative aminoacid/polyamine transporter, permease protein.
  
 
 0.443
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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