STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1368PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: met:M446_0873 peptidase M20. (376 aa)    
Predicted Functional Partners:
Mnod_1369
Microcystin LR degradation protein MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.894
Mnod_0400
PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_2210 extracellular solute-binding protein.
  
     0.739
Mnod_1370
PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_0875 AMP-dependent synthetase and ligase.
  
   0.587
Mnod_2852
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: met:M446_2713 thiamine pyrophosphate binding domain-containing protein.
 
   
 0.508
Mnod_1367
Putative phytochrome sensor protein; PFAM: beta-lactamase domain protein; GAF domain protein; KEGG: met:M446_0877 putative phytochrome sensor protein.
       0.507
Mnod_4754
PFAM: peptidase S45 penicillin amidase; KEGG: met:M446_4245 peptidase S45 penicillin amidase.
     
 0.485
Mnod_3656
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: met:M446_2971 peptidase M20.
 
     0.453
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
 
 0.420
argG
PFAM: argininosuccinate synthase; KEGG: met:M446_6641 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.410
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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