Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1379PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_0844 short-chain dehydrogenase/reductase SDR. (286 aa)    
Predicted Functional Partners:
Mnod_5159
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: met:M446_4494 alcohol dehydrogenase.
 
    0.662
Mnod_1378
KEGG: met:M446_0843 hypothetical protein.
       0.540
Mnod_5249
PFAM: Catalase domain protein; KEGG: met:M446_3285 catalase.
  
  0.528
Mnod_5352
KEGG: met:M446_5045 putative DNA topoisomerase I.
  
 
   0.514
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.510
Mnod_6547
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  0.492
Mnod_1723
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: met:M446_0415 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
  
 0.481
Mnod_3478
KEGG: pzu:PHZ_c0282 hypothetical protein.
  
     0.442
Mnod_0523
PFAM: protein of unknown function DUF421; KEGG: mex:Mext_1108 hypothetical protein.
  
    0.434
Mnod_3359
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase; KEGG: xau:Xaut_0907 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase.
  
 0.422
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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