Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1409PFAM: iron-containing alcohol dehydrogenase; KEGG: met:M446_0826 iron-containing alcohol dehydrogenase. (393 aa)    
Predicted Functional Partners:
Mnod_1411
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_0824 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
  
  
 0.676
Mnod_5387
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: met:M446_6106 zinc-binding alcohol dehydrogenase family protein.
  
 
 0.627
Mnod_6150
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: har:HEAR1610 putative alcohol dehydrogenase with NAD(P)-binding.
  
 
 0.627
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.623
Mnod_1410
KEGG: met:M446_0825 hypothetical protein.
       0.592
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
  
 0.544
Mnod_3292
PFAM: Radical SAM domain protein; KEGG: mca:MCA0073 pyruvate formate lyase-activating enzyme, putative.
  
  
 0.539
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
   
  
 0.497
Mnod_0966
PFAM: thioesterase superfamily protein; KEGG: met:M446_1678 thioesterase superfamily protein.
 
   
 0.494
Mnod_0287
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: met:M446_2324 pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.471
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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